Quantitative trait loci for yield and grain plumpness relative to maturity in three populations of barley (Hordeum vulgare L.) grown in a low rain-fall environment
Identifieur interne : 000514 ( Main/Exploration ); précédent : 000513; suivant : 000515Quantitative trait loci for yield and grain plumpness relative to maturity in three populations of barley (Hordeum vulgare L.) grown in a low rain-fall environment
Auteurs : Bulti Tesso Obsa [Australie] ; Jason Eglinton [Australie] ; Stewart Coventry [Australie] ; Timothy March [Australie] ; Maxime Guillaume [France] ; Thanh Phuoc Le [Viêt Nam] ; Matthew Hayden [Australie] ; Peter Langridge [Australie] ; Delphine Fleury [Australie]Source :
- PLoS ONE [ 1932-6203 ] ; 2017.
Descripteurs français
- KwdFr :
- Australie, Cartographie chromosomique, Grains comestibles (croissance et développement), Grains comestibles (génétique), Hordeum (croissance et développement), Hordeum (génétique), Liaison génétique, Locus de caractère quantitatif, Phénotype, Pluie, Polymorphisme de nucléotide simple, Protéines végétales (génétique), Sécheresses.
- MESH :
- croissance et développement : Grains comestibles, Hordeum.
- génétique : Grains comestibles, Hordeum, Protéines végétales.
- Australie, Cartographie chromosomique, Liaison génétique, Locus de caractère quantitatif, Phénotype, Pluie, Polymorphisme de nucléotide simple, Sécheresses.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : Plant Proteins.
- genetics : Edible Grain, Hordeum.
- growth & development : Edible Grain, Hordeum.
- Australia, Chromosome Mapping, Droughts, Genetic Linkage, Phenotype, Polymorphism, Single Nucleotide, Quantitative Trait Loci, Rain.
Abstract
Identifying yield and grain plumpness QTL that are independent of developmental variation or phenology is of paramount importance for developing widely adapted and stable varieties through the application of marker assisted selection. The current study was designed to dissect the genetic basis of yield performance and grain plumpness in southern Australia using three doubled haploid (DH) populations developed from crosses between adapted parents that are similar in maturity and overall plant development. Three interconnected genetic populations, Commander x Fleet (CF), Commander x WI4304 (CW), and Fleet x WI4304 (FW) developed from crossing of Australian elite barley genotypes, were used to map QTL controlling yield and grain plumpness. QTL for grain plumpness and yield were analysed using genetic linkage maps made of genotyping-by-sequencing markers and major phenology genes, and field trials at three drought prone environments for two growing seasons. Seventeen QTL were detected for grain plumpness. Eighteen yield QTL explaining from 1.2% to 25.0% of the phenotypic variation were found across populations and environments. Significant QTL x environment interaction was observed for all grain plumpness and yield QTL, except
Url:
DOI: 10.1371/journal.pone.0178111
PubMed: 28542571
PubMed Central: 5441627
Affiliations:
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Le document en format XML
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<term>Edible Grain (growth & development)</term>
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<term>Hordeum (génétique)</term>
<term>Liaison génétique</term>
<term>Locus de caractère quantitatif</term>
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<term>Pluie</term>
<term>Polymorphisme de nucléotide simple</term>
<term>Protéines végétales (génétique)</term>
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<front><div type="abstract" xml:lang="en"><p>Identifying yield and grain plumpness QTL that are independent of developmental variation or phenology is of paramount importance for developing widely adapted and stable varieties through the application of marker assisted selection. The current study was designed to dissect the genetic basis of yield performance and grain plumpness in southern Australia using three doubled haploid (DH) populations developed from crosses between adapted parents that are similar in maturity and overall plant development. Three interconnected genetic populations, Commander x Fleet (CF), Commander x WI4304 (CW), and Fleet x WI4304 (FW) developed from crossing of Australian elite barley genotypes, were used to map QTL controlling yield and grain plumpness. QTL for grain plumpness and yield were analysed using genetic linkage maps made of genotyping-by-sequencing markers and major phenology genes, and field trials at three drought prone environments for two growing seasons. Seventeen QTL were detected for grain plumpness. Eighteen yield QTL explaining from 1.2% to 25.0% of the phenotypic variation were found across populations and environments. Significant QTL x environment interaction was observed for all grain plumpness and yield QTL, except <italic>QPlum</italic>
.<italic>FW-4H</italic>
.<italic>1</italic>
and <italic>QYld</italic>
.<italic>FW-2H</italic>
.<italic>1</italic>
. Unlike previous yield QTL studies in barley, none of the major developmental genes, including <italic>Ppd-H1</italic>
, <italic>Vrn-H1</italic>
, <italic>Vrn-H2</italic>
and <italic>Vrn-H3</italic>
, that drive barley adaption significantly affected grain plumpness and yield here. Twenty-two QTL controlled yield or grain plumpness independently of known maturity QTL or genes. Adjustment for maturity effects through co-variance analysis had no major effect on these yield QTL indicating that they control yield <italic>per se</italic>
.</p>
</div>
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<biblStruct><analytic><author><name sortKey="Nishida, H" uniqKey="Nishida H">H Nishida</name>
</author>
<author><name sortKey="Ishihara, D" uniqKey="Ishihara D">D Ishihara</name>
</author>
<author><name sortKey="Ishii, M" uniqKey="Ishii M">M Ishii</name>
</author>
<author><name sortKey="Kaneko, T" uniqKey="Kaneko T">T Kaneko</name>
</author>
<author><name sortKey="Kawahigashi, H" uniqKey="Kawahigashi H">H Kawahigashi</name>
</author>
<author><name sortKey="Akashi, Y" uniqKey="Akashi Y">Y Akashi</name>
</author>
</analytic>
</biblStruct>
</listBibl>
</div1>
</back>
</TEI>
<affiliations><list><country><li>Australie</li>
<li>France</li>
<li>Viêt Nam</li>
</country>
<region><li>Languedoc-Roussillon</li>
<li>Occitanie (région administrative)</li>
</region>
<settlement><li>Montpellier</li>
</settlement>
</list>
<tree><country name="Australie"><noRegion><name sortKey="Obsa, Bulti Tesso" sort="Obsa, Bulti Tesso" uniqKey="Obsa B" first="Bulti Tesso" last="Obsa">Bulti Tesso Obsa</name>
</noRegion>
<name sortKey="Coventry, Stewart" sort="Coventry, Stewart" uniqKey="Coventry S" first="Stewart" last="Coventry">Stewart Coventry</name>
<name sortKey="Eglinton, Jason" sort="Eglinton, Jason" uniqKey="Eglinton J" first="Jason" last="Eglinton">Jason Eglinton</name>
<name sortKey="Fleury, Delphine" sort="Fleury, Delphine" uniqKey="Fleury D" first="Delphine" last="Fleury">Delphine Fleury</name>
<name sortKey="Hayden, Matthew" sort="Hayden, Matthew" uniqKey="Hayden M" first="Matthew" last="Hayden">Matthew Hayden</name>
<name sortKey="Langridge, Peter" sort="Langridge, Peter" uniqKey="Langridge P" first="Peter" last="Langridge">Peter Langridge</name>
<name sortKey="Langridge, Peter" sort="Langridge, Peter" uniqKey="Langridge P" first="Peter" last="Langridge">Peter Langridge</name>
<name sortKey="March, Timothy" sort="March, Timothy" uniqKey="March T" first="Timothy" last="March">Timothy March</name>
</country>
<country name="France"><region name="Occitanie (région administrative)"><name sortKey="Guillaume, Maxime" sort="Guillaume, Maxime" uniqKey="Guillaume M" first="Maxime" last="Guillaume">Maxime Guillaume</name>
</region>
</country>
<country name="Viêt Nam"><noRegion><name sortKey="Le, Thanh Phuoc" sort="Le, Thanh Phuoc" uniqKey="Le T" first="Thanh Phuoc" last="Le">Thanh Phuoc Le</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>
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